Generates balance statistics for matchit
objects from MatchIt.
Usage
# S3 method for matchit
bal.tab(
x,
stats,
int = FALSE,
poly = 1,
distance = NULL,
addl = NULL,
data = NULL,
continuous,
binary,
s.d.denom,
thresholds = NULL,
weights = NULL,
cluster = NULL,
imp = NULL,
pairwise = TRUE,
s.weights = NULL,
abs = FALSE,
subset = NULL,
quick = TRUE,
method,
...
)
Arguments
- x
a
matchit
object; the output of a call toMatchIt::matchit()
.- stats
character
; which statistic(s) should be reported. Seestats
for allowable options. For binary and multi-category treatments,"mean.diffs"
(i.e., mean differences) is the default. For continuous treatments,"correlations"
(i.e., treatment-covariate Pearson correlations) is the default. Multiple options are allowed.- int
logical
ornumeric
; whether or not to include 2-way interactions of covariates included incovs
and inaddl
. Ifnumeric
, will be passed topoly
as well.- poly
numeric
; the highest polynomial of each continuous covariate to display. For example, if 2, squares of each continuous covariate will be displayed (in addition to the covariate itself); if 3, squares and cubes of each continuous covariate will be displayed, etc. If 1, the default, only the base covariate will be displayed. Ifint
is numeric,poly
will take on the value ofint
.- distance
an optional formula or data frame containing distance values (e.g., propensity scores) or a character vector containing their names. If a formula or variable names are specified,
bal.tab()
will look in the argument todata
, if specified. The distance measure (e.g., propensity score) generated bymatchit()
is automatically included and named "distance".- addl
an optional formula or data frame containing additional covariates for which to present balance or a character vector containing their names. If a formula or variable names are specified,
bal.tab()
will look in the arguments to the input object,covs
, anddata
, if specified. For longitudinal treatments, can be a list of allowable arguments, one for each time point.- data
an optional data frame containing variables named in other arguments. For some input object types, this is required.
- continuous
whether mean differences for continuous variables should be standardized (
"std"
) or raw ("raw"
). Default"std"
. Abbreviations allowed. This option can be set globally usingset.cobalt.options()
.- binary
whether mean differences for binary variables (i.e., difference in proportion) should be standardized (
"std"
) or raw ("raw"
). Default"raw"
. Abbreviations allowed. This option can be set globally usingset.cobalt.options()
.- s.d.denom
character
; how the denominator for standardized mean differences should be calculated, if requested. Seecol_w_smd()
for allowable options. Abbreviations allowed. If not specified,bal.tab()
will figure out which one is best based on the estimand of thematchit
object: if ATT,"treated"
; if ATC,"control"
, otherwise"pooled"
.- thresholds
a named vector of balance thresholds, where the name corresponds to the statistic (i.e., in
stats
) that the threshold applies to. For example, to request thresholds on mean differences and variance ratios, one can setthresholds = c(m = .05, v = 2)
. Requesting a threshold automatically requests the display of that statistic. When specified, extra columns are inserted into the Balance table describing whether the requested balance statistics exceeded the threshold or not. Summary tables tallying the number of variables that exceeded and were within the threshold and displaying the variables with the greatest imbalance on that balance measure are added to the output.- weights
a vector, list, or
data.frame
containing weights for each unit, or a string containing the names of the weights variables indata
, or an object with aget.w()
method or a list thereof. The weights can be, e.g., inverse probability weights or matching weights resulting from a matching algorithm.- cluster
either a vector containing cluster membership for each unit or a string containing the name of the cluster membership variable in
data
or the input object. Seeclass-bal.tab.cluster
for details.- imp
either a vector containing imputation indices for each unit or a string containing the name of the imputation index variable in
data
or the input object. Seeclass-bal.tab.imp
for details. Not necessary ifdata
is amids
object.- pairwise
whether balance should be computed for pairs of treatments or for each treatment against all groups combined. See
bal.tab.multi()
for details. This can also be used with a binary treatment to assess balance with respect to the full sample.- s.weights
Optional; either a vector containing sampling weights for each unit or a string containing the name of the sampling weight variable in
data
. These function like regular weights except that both the adjusted and unadjusted samples will be weighted according to these weights if weights are used. Ifs.weights
was specified in the call tomatchit()
, they will automatically be included and do not need be specified again (though there is no harm if they are).- abs
logical
; whether displayed balance statistics should be in absolute value or not.- subset
a
logical
ornumeric
vector denoting whether each observation should be included or which observations should be included. Iflogical
, it should have length equal to the number of units.NA
s will be treated asFALSE
. This can be used as an alternative tocluster
to examine balance on subsets of the data.- quick
logical
; ifTRUE
, will not compute any values that will not be displayed. Set toFALSE
if computed values not displayed will be used later.- method
a character vector containing the method of adjustment. Ignored unless subclassification was used in the original call to
matchit()
. If"weighting"
, the subclassification weights will be used and subclasses will be ignored. If"subclassification"
, balance will be assessed using the subclasses (seeclass-bal.tab.subclass
for details). Abbreviations allowed.- ...
for some input types, other arguments that are required or allowed. Otherwise, further arguments to control display of output. See display options for details.
Value
If subclassification is used and method
is set to "subclassification"
, an object of class "bal.tab.subclass"
containing balance summaries within and across subclasses. See class-bal.tab.subclass
for details.
If matching is used and clusters are not specified, an object of class "bal.tab"
containing balance summaries for the matchit
object. See bal.tab()
for details.
If clusters are specified, an object of class "bal.tab.cluster"
containing balance summaries within each cluster and a summary of balance across clusters. See class-bal.tab.cluster
for details.
Details
bal.tab.matchit()
generates a list of balance summaries for the matchit
object given, and functions similarly to MatchIt::summary.matchit()
. bal.tab()
behaves differently depending on whether subclasses are used in conditioning or not. If they are used, bal.tab()
creates balance statistics for each subclass and for the sample in aggregate; see class-bal.tab.subclass
for more information.
See also
bal.tab()
for details of calculations.
Examples
library(MatchIt); data("lalonde", package = "cobalt")
#>
#> Attaching package: ‘MatchIt’
#> The following object is masked _by_ ‘.GlobalEnv’:
#>
#> lalonde
#> The following object is masked from ‘package:cobalt’:
#>
#> lalonde
## Nearest Neighbor matching
m.out1 <- matchit(treat ~ age + educ + race +
married + nodegree + re74 + re75,
data = lalonde, method = "nearest")
bal.tab(m.out1, un = TRUE, m.threshold = .1,
v.threshold = 2)
#> Balance Measures
#> Type Diff.Un V.Ratio.Un Diff.Adj M.Threshold V.Ratio.Adj
#> distance Distance 1.7941 0.9211 0.9739 0.7566
#> age Contin. -0.3094 0.4400 0.0718 Balanced, <0.1 0.4568
#> educ Contin. 0.0550 0.4959 -0.1290 Not Balanced, >0.1 0.5721
#> race_black Binary 0.6404 . 0.3730 Not Balanced, >0.1 .
#> race_hispan Binary -0.0827 . -0.1568 Not Balanced, >0.1 .
#> race_white Binary -0.5577 . -0.2162 Not Balanced, >0.1 .
#> married Binary -0.3236 . -0.0216 Balanced, <0.1 .
#> nodegree Binary 0.1114 . 0.0703 Balanced, <0.1 .
#> re74 Contin. -0.7211 0.5181 -0.0505 Balanced, <0.1 1.3289
#> re75 Contin. -0.2903 0.9563 -0.0257 Balanced, <0.1 1.4956
#> V.Threshold
#> distance Balanced, <2
#> age Not Balanced, >2
#> educ Balanced, <2
#> race_black
#> race_hispan
#> race_white
#> married
#> nodegree
#> re74 Balanced, <2
#> re75 Balanced, <2
#>
#> Balance tally for mean differences
#> count
#> Balanced, <0.1 5
#> Not Balanced, >0.1 4
#>
#> Variable with the greatest mean difference
#> Variable Diff.Adj M.Threshold
#> race_black 0.373 Not Balanced, >0.1
#>
#> Balance tally for variance ratios
#> count
#> Balanced, <2 4
#> Not Balanced, >2 1
#>
#> Variable with the greatest variance ratio
#> Variable V.Ratio.Adj V.Threshold
#> age 0.4568 Not Balanced, >2
#>
#> Sample sizes
#> Control Treated
#> All 429 185
#> Matched 185 185
#> Unmatched 244 0
## Subclassification
m.out2 <- matchit(treat ~ age + educ + race +
married + nodegree + re74 + re75,
data = lalonde, method = "subclass")
bal.tab(m.out2, disp.subclass = TRUE)
#> Balance by subclass
#> - - - Subclass 1 - - -
#> Type Diff.Adj
#> distance Distance 0.2785
#> age Contin. -0.4024
#> educ Contin. 0.1142
#> race_black Binary 0.0823
#> race_hispan Binary 0.1492
#> race_white Binary -0.2315
#> married Binary -0.2877
#> nodegree Binary -0.0003
#> re74 Contin. -0.5864
#> re75 Contin. -0.1729
#>
#> - - - Subclass 2 - - -
#> Type Diff.Adj
#> distance Distance 0.1873
#> age Contin. -0.7473
#> educ Contin. 0.1183
#> race_black Binary 0.0094
#> race_hispan Binary -0.0094
#> race_white Binary 0.0000
#> married Binary -0.2473
#> nodegree Binary -0.0121
#> re74 Contin. -0.0352
#> re75 Contin. -0.0970
#>
#> - - - Subclass 3 - - -
#> Type Diff.Adj
#> distance Distance -0.0140
#> age Contin. 0.0524
#> educ Contin. 0.1372
#> race_black Binary 0.0000
#> race_hispan Binary 0.0000
#> race_white Binary 0.0000
#> married Binary 0.3550
#> nodegree Binary 0.2191
#> re74 Contin. -0.2669
#> re75 Contin. -0.0970
#>
#> - - - Subclass 4 - - -
#> Type Diff.Adj
#> distance Distance -0.0003
#> age Contin. -0.0499
#> educ Contin. -0.1436
#> race_black Binary 0.0000
#> race_hispan Binary 0.0000
#> race_white Binary 0.0000
#> married Binary -0.1116
#> nodegree Binary -0.0417
#> re74 Contin. -0.0073
#> re75 Contin. -0.0801
#>
#> - - - Subclass 5 - - -
#> Type Diff.Adj
#> distance Distance -0.0224
#> age Contin. 0.2640
#> educ Contin. -0.2977
#> race_black Binary 0.0000
#> race_hispan Binary 0.0000
#> race_white Binary 0.0000
#> married Binary 0.0000
#> nodegree Binary 0.0376
#> re74 Contin. 0.0190
#> re75 Contin. 0.1233
#>
#> - - - Subclass 6 - - -
#> Type Diff.Adj
#> distance Distance 0.0143
#> age Contin. 0.5245
#> educ Contin. 0.2781
#> race_black Binary 0.0000
#> race_hispan Binary 0.0000
#> race_white Binary 0.0000
#> married Binary 0.0000
#> nodegree Binary -0.1290
#> re74 Contin. -0.0152
#> re75 Contin. -0.2407
#>